Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLN5O75503 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLN5O75503 ZNF815P-204ENST00000434898 1737 ntBASIC15.17■□□□□ 0.02
CLN5O75503 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLN5O75503 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLN5O75503 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLN5O75503 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.17■□□□□ 0.02
CLN5O75503 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLN5O75503 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 AC092368.3-202ENST00000574180 1591 ntBASIC15.16■□□□□ 0.02
CLN5O75503 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.16■□□□□ 0.02
CLN5O75503 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLN5O75503 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLN5O75503 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.16■□□□□ 0.02
CLN5O75503 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.16■□□□□ 0.02
CLN5O75503 GUSBP6-202ENST00000438529 1198 ntBASIC15.16■□□□□ 0.02
CLN5O75503 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.16■□□□□ 0.02
CLN5O75503 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.16■□□□□ 0.02
CLN5O75503 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.16■□□□□ 0.02
CLN5O75503 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.16■□□□□ 0.02
CLN5O75503 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.16■□□□□ 0.02
CLN5O75503 HLA-B-256ENST00000639848 1089 ntBASIC15.16■□□□□ 0.02
CLN5O75503 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLN5O75503 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLN5O75503 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.16■□□□□ 0.02
CLN5O75503 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.16■□□□□ 0.02
CLN5O75503 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLN5O75503 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLN5O75503 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.15■□□□□ 0.02
CLN5O75503 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLN5O75503 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 AC124283.5-201ENST00000624661 1809 ntBASIC15.15■□□□□ 0.02
CLN5O75503 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLN5O75503 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.15■□□□□ 0.02
CLN5O75503 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.15■□□□□ 0.02
CLN5O75503 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.15■□□□□ 0.02
CLN5O75503 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.15■□□□□ 0.02
CLN5O75503 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLN5O75503 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 MYC-209ENST00000641252 345 ntBASIC15.15■□□□□ 0.02
CLN5O75503 AP006587.1-201ENST00000534129 1502 ntBASIC15.15■□□□□ 0.02
CLN5O75503 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLN5O75503 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CLN5O75503 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.15■□□□□ 0.02
CLN5O75503 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLN5O75503 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLN5O75503 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.14■□□□□ 0.01
CLN5O75503 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLN5O75503 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLN5O75503 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms