Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM3O75382 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM3O75382 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM3O75382 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM3O75382 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRIM3O75382 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM3O75382 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 AC010203.1-204ENST00000548782 407 ntBASIC17.32■□□□□ 0.36
TRIM3O75382 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 RN7SL850P-201ENST00000579959 291 ntBASIC17.32■□□□□ 0.36
TRIM3O75382 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRIM3O75382 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM3O75382 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM3O75382 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM3O75382 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM3O75382 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM3O75382 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM3O75382 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM3O75382 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRIM3O75382 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 TMPOP1-202ENST00000424642 1267 ntBASIC17.31■□□□□ 0.36
TRIM3O75382 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM3O75382 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.31■□□□□ 0.36
TRIM3O75382 AP003041.3-201ENST00000527151 707 ntBASIC17.31■□□□□ 0.36
TRIM3O75382 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM3O75382 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM3O75382 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
TRIM3O75382 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM3O75382 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM3O75382 AC141586.3-201ENST00000562166 1838 ntBASIC17.31■□□□□ 0.36
TRIM3O75382 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM3O75382 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM3O75382 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM3O75382 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM3O75382 PCDHB18P-201ENST00000524813 2368 ntBASIC17.3■□□□□ 0.36
TRIM3O75382 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM3O75382 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM3O75382 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM3O75382 AL390961.4-201ENST00000623958 2535 ntBASIC17.3■□□□□ 0.36
TRIM3O75382 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM3O75382 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRIM3O75382 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM3O75382 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM3O75382 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM3O75382 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM3O75382 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM3O75382 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms