Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.38■□□□□ 0.37
HCN1O60741 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.38■□□□□ 0.37
HCN1O60741 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.38■□□□□ 0.37
HCN1O60741 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 LIN28AP1-201ENST00000429574 405 ntBASIC17.38■□□□□ 0.37
HCN1O60741 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.38■□□□□ 0.37
HCN1O60741 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HCN1O60741 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.38■□□□□ 0.37
HCN1O60741 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.38■□□□□ 0.37
HCN1O60741 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.38■□□□□ 0.37
HCN1O60741 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
HCN1O60741 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCN1O60741 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.37■□□□□ 0.37
HCN1O60741 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
HCN1O60741 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.37■□□□□ 0.37
HCN1O60741 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HCN1O60741 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.37■□□□□ 0.37
HCN1O60741 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HCN1O60741 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.37■□□□□ 0.37
HCN1O60741 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.37■□□□□ 0.37
HCN1O60741 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.37■□□□□ 0.37
HCN1O60741 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.37■□□□□ 0.37
HCN1O60741 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.37■□□□□ 0.37
HCN1O60741 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.37■□□□□ 0.37
HCN1O60741 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
HCN1O60741 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.37■□□□□ 0.37
HCN1O60741 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 AC073508.3-201ENST00000619697 1419 ntBASIC17.37■□□□□ 0.37
HCN1O60741 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCN1O60741 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.37■□□□□ 0.37
HCN1O60741 KRT8P41-201ENST00000533985 1514 ntBASIC17.37■□□□□ 0.37
HCN1O60741 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 AC093525.10-201ENST00000625130 1569 ntBASIC17.36■□□□□ 0.37
HCN1O60741 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.36■□□□□ 0.37
HCN1O60741 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
HCN1O60741 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.36■□□□□ 0.37
HCN1O60741 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.36■□□□□ 0.37
HCN1O60741 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.36■□□□□ 0.37
HCN1O60741 ATP5G1P1-201ENST00000448724 379 ntBASIC17.36■□□□□ 0.37
HCN1O60741 ECEL1P2-202ENST00000465689 757 ntBASIC17.36■□□□□ 0.37
HCN1O60741 CA15P1-201ENST00000481698 905 ntBASIC17.36■□□□□ 0.37
HCN1O60741 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.36■□□□□ 0.37
HCN1O60741 AC010653.2-201ENST00000623505 997 ntBASIC17.36■□□□□ 0.37
HCN1O60741 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCN1O60741 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms