Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SDHDO14521 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.98■□□□□ 0.47
SDHDO14521 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.98■□□□□ 0.47
SDHDO14521 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SDHDO14521 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SDHDO14521 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.98■□□□□ 0.47
SDHDO14521 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SDHDO14521 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.97■□□□□ 0.47
SDHDO14521 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SDHDO14521 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
SDHDO14521 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 KRT17P3-201ENST00000420566 1262 ntBASIC17.97■□□□□ 0.47
SDHDO14521 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.97■□□□□ 0.47
SDHDO14521 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.97■□□□□ 0.47
SDHDO14521 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.97■□□□□ 0.47
SDHDO14521 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SDHDO14521 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.97■□□□□ 0.47
SDHDO14521 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SDHDO14521 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.97■□□□□ 0.47
SDHDO14521 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SDHDO14521 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SDHDO14521 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SDHDO14521 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SDHDO14521 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.96■□□□□ 0.47
SDHDO14521 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SDHDO14521 KRT18P41-201ENST00000518924 1277 ntBASIC17.96■□□□□ 0.47
SDHDO14521 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
SDHDO14521 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SDHDO14521 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.96■□□□□ 0.47
SDHDO14521 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SDHDO14521 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SDHDO14521 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 AC239809.2-201ENST00000415381 517 ntBASIC17.95■□□□□ 0.46
SDHDO14521 NIFKP9-201ENST00000419265 221 ntBASIC17.95■□□□□ 0.46
SDHDO14521 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.95■□□□□ 0.46
SDHDO14521 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.95■□□□□ 0.46
SDHDO14521 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.95■□□□□ 0.46
SDHDO14521 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.95■□□□□ 0.46
SDHDO14521 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SDHDO14521 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SDHDO14521 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SDHDO14521 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SDHDO14521 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms