Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM38O00635 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM38O00635 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRIM38O00635 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM38O00635 KRT18P38-201ENST00000449496 1282 ntBASIC18.7■□□□□ 0.58
TRIM38O00635 AL671277.2-201ENST00000458060 996 ntBASIC18.7■□□□□ 0.58
TRIM38O00635 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM38O00635 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 PRSS44-201ENST00000515154 1146 ntBASIC18.7■□□□□ 0.58
TRIM38O00635 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM38O00635 AL161938.1-201ENST00000569833 2180 ntBASIC18.7■□□□□ 0.58
TRIM38O00635 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM38O00635 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRIM38O00635 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM38O00635 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM38O00635 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM38O00635 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM38O00635 AC104581.1-202ENST00000635932 2618 ntBASIC18.7■□□□□ 0.58
TRIM38O00635 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 IER3-202ENST00000376377 1350 ntBASIC18.69■□□□□ 0.58
TRIM38O00635 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM38O00635 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM38O00635 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 KRT8P11-201ENST00000409686 1436 ntBASIC18.69■□□□□ 0.58
TRIM38O00635 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM38O00635 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM38O00635 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM38O00635 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM38O00635 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM38O00635 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM38O00635 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM38O00635 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM38O00635 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM38O00635 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM38O00635 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM38O00635 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM38O00635 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRIM38O00635 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM38O00635 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TRIM38O00635 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM38O00635 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM38O00635 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.68■□□□□ 0.58
TRIM38O00635 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM38O00635 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM38O00635 AC008622.2-201ENST00000617006 1229 ntBASIC18.68■□□□□ 0.58
TRIM38O00635 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 AC006333.2-201ENST00000607957 2099 ntBASIC18.68■□□□□ 0.58
TRIM38O00635 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM38O00635 AL390961.4-201ENST00000623958 2535 ntBASIC18.68■□□□□ 0.58
TRIM38O00635 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM38O00635 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRIM38O00635 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM38O00635 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM38O00635 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM38O00635 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM38O00635 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM38O00635 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRIM38O00635 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM38O00635 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM38O00635 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM38O00635 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms