Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NDUFA4O00483 KRT8P9-201ENST00000558927 1449 ntBASIC14.26□□□□□ -0.13
NDUFA4O00483 HOXB1-202ENST00000577092 1414 ntBASIC14.26□□□□□ -0.13
NDUFA4O00483 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA4O00483 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.26□□□□□ -0.13
NDUFA4O00483 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA4O00483 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.26□□□□□ -0.13
NDUFA4O00483 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA4O00483 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA4O00483 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.26□□□□□ -0.13
NDUFA4O00483 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA4O00483 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.26□□□□□ -0.13
NDUFA4O00483 AL499627.1-201ENST00000569373 2188 ntBASIC14.26□□□□□ -0.13
NDUFA4O00483 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 AC126763.1-201ENST00000552015 2118 ntBASIC14.26□□□□□ -0.13
NDUFA4O00483 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFA4O00483 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NDUFA4O00483 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFA4O00483 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.25□□□□□ -0.13
NDUFA4O00483 KRT18P22-201ENST00000402024 1347 ntBASIC14.25□□□□□ -0.13
NDUFA4O00483 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 HMGA1P5-201ENST00000412453 271 ntBASIC14.25□□□□□ -0.13
NDUFA4O00483 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFA4O00483 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
NDUFA4O00483 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NDUFA4O00483 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NDUFA4O00483 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NDUFA4O00483 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NDUFA4O00483 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFA4O00483 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.25□□□□□ -0.13
NDUFA4O00483 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA4O00483 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.24□□□□□ -0.13
NDUFA4O00483 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 LINC01568-207ENST00000641790 1380 ntBASIC14.24□□□□□ -0.13
NDUFA4O00483 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.24□□□□□ -0.13
NDUFA4O00483 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.24□□□□□ -0.13
NDUFA4O00483 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.24□□□□□ -0.13
NDUFA4O00483 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NDUFA4O00483 KRT18P23-201ENST00000435622 1283 ntBASIC14.24□□□□□ -0.13
NDUFA4O00483 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
NDUFA4O00483 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.24□□□□□ -0.13
NDUFA4O00483 AC009065.1-201ENST00000564055 1225 ntBASIC14.24□□□□□ -0.13
NDUFA4O00483 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NDUFA4O00483 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
NDUFA4O00483 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NDUFA4O00483 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms