Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.73■□□□□ 0.43
RTCAO00442 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.73■□□□□ 0.43
RTCAO00442 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.73■□□□□ 0.43
RTCAO00442 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RTCAO00442 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.73■□□□□ 0.43
RTCAO00442 AC090164.3-201ENST00000610780 2143 ntBASIC17.73■□□□□ 0.43
RTCAO00442 FAM87A-204ENST00000613235 858 ntBASIC17.73■□□□□ 0.43
RTCAO00442 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.73■□□□□ 0.43
RTCAO00442 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RTCAO00442 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RTCAO00442 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
RTCAO00442 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
RTCAO00442 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.72■□□□□ 0.43
RTCAO00442 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RTCAO00442 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.72■□□□□ 0.43
RTCAO00442 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.72■□□□□ 0.43
RTCAO00442 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.72■□□□□ 0.43
RTCAO00442 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.72■□□□□ 0.43
RTCAO00442 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.72■□□□□ 0.43
RTCAO00442 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RTCAO00442 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
RTCAO00442 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RTCAO00442 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.72■□□□□ 0.43
RTCAO00442 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 AC128688.1-201ENST00000487626 519 ntBASIC17.72■□□□□ 0.43
RTCAO00442 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.72■□□□□ 0.43
RTCAO00442 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.72■□□□□ 0.43
RTCAO00442 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTCAO00442 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RTCAO00442 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.71■□□□□ 0.43
RTCAO00442 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTCAO00442 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.71■□□□□ 0.43
RTCAO00442 AC010653.2-201ENST00000623505 997 ntBASIC17.71■□□□□ 0.43
RTCAO00442 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.71■□□□□ 0.43
RTCAO00442 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTCAO00442 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.71■□□□□ 0.43
RTCAO00442 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTCAO00442 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RTCAO00442 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
RTCAO00442 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RTCAO00442 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.7■□□□□ 0.42
RTCAO00442 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RTCAO00442 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RTCAO00442 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 AC138932.1-201ENST00000534164 6830 ntBASIC17.7■□□□□ 0.42
RTCAO00442 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RTCAO00442 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.7■□□□□ 0.42
RTCAO00442 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.7■□□□□ 0.42
RTCAO00442 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RTCAO00442 AC133561.5-201ENST00000635547 218 ntBASIC17.7■□□□□ 0.42
RTCAO00442 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
RTCAO00442 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTCAO00442 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms