Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 TCAF2P1-201ENST00000291129 2421 ntBASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 AC011484.1-201ENST00000377652 1995 ntBASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CHKB-CPT1BH3BT56 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.75
CHKB-CPT1BH3BT56 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC10.33□□□□□ -0.75
CHKB-CPT1BH3BT56 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC10.33□□□□□ -0.75
CHKB-CPT1BH3BT56 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 ABR-203ENST00000536794 2213 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 STRCP1-201ENST00000509801 5328 ntBASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 AL031602.1-201ENST00000633169 911 ntBASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 AC068587.7-201ENST00000641602 218 ntBASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 EFTUD1P1-204ENST00000560401 1798 ntBASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 STK25-204ENST00000405585 1643 ntTSL 2 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CHKB-CPT1BH3BT56 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms