Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC009113.1-201ENST00000570267 2443 ntBASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC012313.1-201ENST00000593393 3059 ntBASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TMX2-CTNND1H3BSU7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 TSPY21P-201ENST00000433481 731 ntBASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TMX2-CTNND1H3BSU7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC120498.9-201ENST00000339021 3867 ntBASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 AL450487.1-201ENST00000426799 995 ntBASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 AL691432.3-201ENST00000621860 400 ntBASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMX2-CTNND1H3BSU7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TMX2-CTNND1H3BSU7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.2■□□□□ 0.5
TMX2-CTNND1H3BSU7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms