Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 AC009533.2-201ENST00000543664 586 ntBASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 AC005336.2-201ENST00000593183 939 ntBASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C1QTNF9BB2RNN3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 AC254562.1-201ENST00000417586 456 ntBASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 MIR4469-201ENST00000583919 79 ntBASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C1QTNF9BB2RNN3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 AC092474.2-201ENST00000424288 719 ntBASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.4■□□□□ 0.38
C1QTNF9BB2RNN3 HOXB1-202ENST00000577092 1414 ntBASIC17.39■□□□□ 0.38
C1QTNF9BB2RNN3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 AC104417.2-201ENST00000562989 1793 ntBASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 BCRP1-201ENST00000444246 691 ntBASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1QTNF9BB2RNN3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.38■□□□□ 0.37
C1QTNF9BB2RNN3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C1QTNF9BB2RNN3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1QTNF9BB2RNN3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1QTNF9BB2RNN3 TP73-AS1-210ENST00000637775 1455 ntBASIC17.38■□□□□ 0.37
C1QTNF9BB2RNN3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1QTNF9BB2RNN3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms