Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 KRT18P29-201ENST00000397031 1267 ntBASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 AC091390.4-202ENST00000476426 537 ntBASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 PRSS44-201ENST00000515154 1146 ntBASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 AC011298.2-201ENST00000617989 482 ntBASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 AL031985.4-201ENST00000642138 673 ntBASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AF186192.3-201ENST00000583427 947 ntBASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AC126763.1-201ENST00000552015 2118 ntBASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AC018470.1-201ENST00000624790 3129 ntBASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-3A0A0B4J271 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 AC073195.1-201ENST00000607241 877 ntBASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-3A0A0B4J271 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms