Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 MTMR9LP-203ENST00000426597 1545 ntBASIC16■□□□□ 0.15
TRAV18A0A075B6X5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 AF201337.1-201ENST00000520239 748 ntBASIC16■□□□□ 0.15
TRAV18A0A075B6X5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 MARS-234ENST00000630571 216 ntTSL 5 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 MARS-235ENST00000630803 183 ntTSL 3 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 MYC-208ENST00000641036 567 ntBASIC16■□□□□ 0.15
TRAV18A0A075B6X5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AC004911.1-201ENST00000416316 871 ntBASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 SLC25A6P5-201ENST00000435663 894 ntBASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AL160286.2-201ENST00000567150 934 ntBASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AC093677.2-201ENST00000600169 1863 ntBASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 AC106820.2-201ENST00000563775 3264 ntBASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV18A0A075B6X5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 DUSP5P2-201ENST00000426873 1033 ntBASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV18A0A075B6X5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms