Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 AP003071.4-201ENST00000562276 1284 ntBASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 REXO1L10P-201ENST00000615707 1290 ntBASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 REXO1L12P-201ENST00000622156 912 ntBASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DRB4X5D2U9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 AC083906.6-201ENST00000641366 219 ntBASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DRB4X5D2U9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 KRT8P3-201ENST00000519669 1449 ntBASIC14.02□□□□□ -0.16
HLA-DRB4X5D2U9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 TSPY7P-201ENST00000431358 1114 ntBASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 MFAP1P1-201ENST00000442257 1255 ntBASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 AC097488.1-201ENST00000507834 756 ntBASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 SLC25A1P4-201ENST00000567977 778 ntBASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DRB4X5D2U9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms