Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 AL671277.2-201ENST00000458060 996 ntBASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 AP003041.3-201ENST00000527151 707 ntBASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB11Q9Y5F2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 FAM86EP-206ENST00000510506 987 ntBASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB11Q9Y5F2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 AL359075.1-203ENST00000462729 1002 ntBASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB11Q9Y5F2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 AC008622.2-201ENST00000617006 1229 ntBASIC18.2■□□□□ 0.5
PCDHB11Q9Y5F2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms