Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP22Q9UPT9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.58■□□□□ 0.41
USP22Q9UPT9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
USP22Q9UPT9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 PRKY-204ENST00000533551 1019 ntBASIC17.58■□□□□ 0.4
USP22Q9UPT9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 AC233263.1-201ENST00000578059 224 ntBASIC17.58■□□□□ 0.4
USP22Q9UPT9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP22Q9UPT9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
USP22Q9UPT9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 RNA5SP413-201ENST00000516373 109 ntBASIC17.57■□□□□ 0.4
USP22Q9UPT9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP22Q9UPT9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.57■□□□□ 0.4
USP22Q9UPT9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 CD99P1-205ENST00000527459 561 ntBASIC17.56■□□□□ 0.4
USP22Q9UPT9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 AC106820.2-201ENST00000563775 3264 ntBASIC17.56■□□□□ 0.4
USP22Q9UPT9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.56■□□□□ 0.4
USP22Q9UPT9 AC138028.4-201ENST00000564984 1845 ntBASIC17.56■□□□□ 0.4
USP22Q9UPT9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP22Q9UPT9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.55■□□□□ 0.4
USP22Q9UPT9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 AC008556.1-201ENST00000610908 2040 ntBASIC17.55■□□□□ 0.4
USP22Q9UPT9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.55■□□□□ 0.4
USP22Q9UPT9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.55■□□□□ 0.4
USP22Q9UPT9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.55■□□□□ 0.4
USP22Q9UPT9 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.55■□□□□ 0.4
USP22Q9UPT9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
USP22Q9UPT9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
USP22Q9UPT9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.55■□□□□ 0.4
USP22Q9UPT9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.55■□□□□ 0.4
USP22Q9UPT9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms