Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA9Q9UGM1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA9Q9UGM1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA9Q9UGM1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA9Q9UGM1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA9Q9UGM1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 BX088651.1-201ENST00000540551 451 ntBASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 NAPSB-206ENST00000562112 1266 ntBASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 AL354751.1-201ENST00000412768 1863 ntBASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA9Q9UGM1 AL109659.2-201ENST00000606809 1674 ntBASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 TSPY14P-201ENST00000303979 915 ntBASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 MCCD1P1-208ENST00000445732 328 ntBASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 AL353719.1-201ENST00000566847 864 ntBASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 GPAT2P1-201ENST00000444924 1672 ntBASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA9Q9UGM1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 KRT8P9-201ENST00000558927 1449 ntBASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 AC092338.2-201ENST00000568827 1415 ntBASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 MTMR9LP-203ENST00000426597 1545 ntBASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 AC073592.3-201ENST00000625118 1834 ntBASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 AL023284.2-201ENST00000405850 579 ntBASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 EGLN1P1-201ENST00000531623 762 ntBASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHRNA9Q9UGM1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRNA9Q9UGM1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA9Q9UGM1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRNA9Q9UGM1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNA9Q9UGM1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNA9Q9UGM1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRNA9Q9UGM1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNA9Q9UGM1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms