Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 MIR3180-4-201ENST00000582223 153 ntBASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 AL136038.4-201ENST00000603606 1261 ntBASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 AL645929.1-201ENST00000420084 975 ntBASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 HLA-F-220ENST00000434407 884 ntBASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 AL391807.1-203ENST00000604392 2365 ntBASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE7Q9UBL6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.02■□□□□ 0.48
CPNE7Q9UBL6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE7Q9UBL6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.02■□□□□ 0.47
CPNE7Q9UBL6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE7Q9UBL6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE7Q9UBL6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE7Q9UBL6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE7Q9UBL6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE7Q9UBL6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE7Q9UBL6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 AC069148.1-201ENST00000608741 768 ntBASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 AC093458.2-201ENST00000623150 629 ntBASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE7Q9UBL6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms