Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 RN7SL606P-201ENST00000472779 293 ntBASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 AL160237.2-201ENST00000556165 472 ntBASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 AP005901.3-202ENST00000581653 237 ntBASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 LINC01711-201ENST00000598340 967 ntBASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1R1Q9NWW0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 AC099343.3-201ENST00000605834 2503 ntBASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 HEIH-201ENST00000623091 1652 ntBASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 AC093484.2-201ENST00000580996 2166 ntBASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 IGHV3-47-201ENST00000425060 335 ntBASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 KRT16P4-201ENST00000453883 522 ntBASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 Z69720.1-201ENST00000601483 472 ntBASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.3■□□□□ 0.68
HCFC1R1Q9NWW0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 GUSBP12-201ENST00000513727 720 ntBASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 AL353692.3-201ENST00000407031 1396 ntBASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
HCFC1R1Q9NWW0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms