Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 AC024243.1-201ENST00000609234 778 ntBASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ECHDC1Q9NTX5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 RCN1P1-201ENST00000400413 996 ntBASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 BX664615.1-201ENST00000443558 458 ntBASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 AC092865.7-201ENST00000641832 219 ntBASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.65■■□□□ 1.22
ECHDC1Q9NTX5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ECHDC1Q9NTX5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ECHDC1Q9NTX5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ECHDC1Q9NTX5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ECHDC1Q9NTX5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.64■■□□□ 1.22
ECHDC1Q9NTX5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ECHDC1Q9NTX5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.64■■□□□ 1.22
ECHDC1Q9NTX5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 COX11P1-201ENST00000489116 835 ntBASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 AL023973.1-201ENST00000624619 620 ntBASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
ECHDC1Q9NTX5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 AC139887.4-201ENST00000607877 719 ntBASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ECHDC1Q9NTX5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ECHDC1Q9NTX5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms