Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 AC008550.1-201ENST00000511500 884 ntBASIC16.83■□□□□ 0.28
HINT3Q9NQE9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 MIR718-201ENST00000390190 70 ntBASIC16.82■□□□□ 0.28
HINT3Q9NQE9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HINT3Q9NQE9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 RPS2P4-201ENST00000476944 856 ntBASIC16.81■□□□□ 0.28
HINT3Q9NQE9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HINT3Q9NQE9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 AL135905.2-201ENST00000584934 1404 ntBASIC16.8■□□□□ 0.28
HINT3Q9NQE9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms