Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.41■□□□□ 0.38
VCX3AQ9NNX9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 FLJ38576-201ENST00000623820 2459 ntBASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.4■□□□□ 0.38
VCX3AQ9NNX9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VCX3AQ9NNX9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
VCX3AQ9NNX9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 TSPY26P-201ENST00000476365 1326 ntBASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.39■□□□□ 0.37
VCX3AQ9NNX9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 SLC7A5P2-201ENST00000553010 536 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 DUX4L2-201ENST00000561772 1275 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 MIR4767-201ENST00000582827 78 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 DUX4L6-201ENST00000626483 1275 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 DUX4L1-201ENST00000627662 1275 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 DUX4L8-201ENST00000629013 1275 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 DUX4L3-201ENST00000630187 1275 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 DUX4L7-201ENST00000630678 1275 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 DUX4L5-201ENST00000630834 1275 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 AC083906.6-201ENST00000641366 219 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 AL121761.2-201ENST00000598007 1648 ntBASIC17.38■□□□□ 0.37
VCX3AQ9NNX9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms