Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD248Q9HCU0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD248Q9HCU0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.53■□□□□ 0.72
CD248Q9HCU0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.53■□□□□ 0.72
CD248Q9HCU0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD248Q9HCU0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD248Q9HCU0 LINC01465-201ENST00000408887 1940 ntBASIC19.53■□□□□ 0.72
CD248Q9HCU0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD248Q9HCU0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.52■□□□□ 0.72
CD248Q9HCU0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.52■□□□□ 0.72
CD248Q9HCU0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.52■□□□□ 0.72
CD248Q9HCU0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.52■□□□□ 0.72
CD248Q9HCU0 AC087388.1-201ENST00000571370 1112 ntBASIC19.52■□□□□ 0.72
CD248Q9HCU0 AC139887.4-201ENST00000607877 719 ntBASIC19.52■□□□□ 0.72
CD248Q9HCU0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CD248Q9HCU0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CD248Q9HCU0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD248Q9HCU0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.52■□□□□ 0.71
CD248Q9HCU0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
CD248Q9HCU0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.52■□□□□ 0.71
CD248Q9HCU0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD248Q9HCU0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD248Q9HCU0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CD248Q9HCU0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD248Q9HCU0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 TNRC18P3-201ENST00000441896 2691 ntBASIC19.51■□□□□ 0.71
CD248Q9HCU0 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.51■□□□□ 0.71
CD248Q9HCU0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 AL353719.1-201ENST00000566847 864 ntBASIC19.51■□□□□ 0.71
CD248Q9HCU0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
CD248Q9HCU0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD248Q9HCU0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 TREX1-205ENST00000625293 1783 ntBASIC19.5■□□□□ 0.71
CD248Q9HCU0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 AL691432.2-201ENST00000607222 2038 ntBASIC19.5■□□□□ 0.71
CD248Q9HCU0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
CD248Q9HCU0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD248Q9HCU0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.49■□□□□ 0.71
CD248Q9HCU0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD248Q9HCU0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms