Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 KRT18P41-201ENST00000518924 1277 ntBASIC15.75■□□□□ 0.11
HES4Q9HCC6 AL355075.4-201ENST00000554988 638 ntBASIC15.75■□□□□ 0.11
HES4Q9HCC6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 AP000525.1-201ENST00000608286 694 ntBASIC15.75■□□□□ 0.11
HES4Q9HCC6 AC090164.3-201ENST00000610780 2143 ntBASIC15.75■□□□□ 0.11
HES4Q9HCC6 MYC-208ENST00000641036 567 ntBASIC15.75■□□□□ 0.11
HES4Q9HCC6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 AC008556.1-201ENST00000610908 2040 ntBASIC15.75■□□□□ 0.11
HES4Q9HCC6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.75■□□□□ 0.11
HES4Q9HCC6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HES4Q9HCC6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.74■□□□□ 0.11
HES4Q9HCC6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 AC005082.1-201ENST00000413042 2259 ntBASIC15.74■□□□□ 0.11
HES4Q9HCC6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.74■□□□□ 0.11
HES4Q9HCC6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HES4Q9HCC6 MCCD1P1-208ENST00000445732 328 ntBASIC15.74■□□□□ 0.11
HES4Q9HCC6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.74■□□□□ 0.11
HES4Q9HCC6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 AC112777.1-201ENST00000540175 1423 ntBASIC15.74■□□□□ 0.11
HES4Q9HCC6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.74■□□□□ 0.11
HES4Q9HCC6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HES4Q9HCC6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 AC009113.1-201ENST00000570267 2443 ntBASIC15.73■□□□□ 0.11
HES4Q9HCC6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 AL499627.1-201ENST00000569373 2188 ntBASIC15.73■□□□□ 0.11
HES4Q9HCC6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HES4Q9HCC6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HES4Q9HCC6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HES4Q9HCC6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HES4Q9HCC6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HES4Q9HCC6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HES4Q9HCC6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.72■□□□□ 0.11
HES4Q9HCC6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HES4Q9HCC6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HES4Q9HCC6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.72■□□□□ 0.11
HES4Q9HCC6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.72■□□□□ 0.11
HES4Q9HCC6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HES4Q9HCC6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HES4Q9HCC6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HES4Q9HCC6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms