Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MRM3Q9HC36 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRM3Q9HC36 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 AP003041.3-201ENST00000527151 707 ntBASIC18.61■□□□□ 0.57
MRM3Q9HC36 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 WWOX-216ENST00000569818 525 ntBASIC18.61■□□□□ 0.57
MRM3Q9HC36 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 AP000525.1-201ENST00000608286 694 ntBASIC18.61■□□□□ 0.57
MRM3Q9HC36 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.61■□□□□ 0.57
MRM3Q9HC36 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 NOC2LP1-202ENST00000452600 2235 ntBASIC18.61■□□□□ 0.57
MRM3Q9HC36 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRM3Q9HC36 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 AC036111.1-201ENST00000533973 1582 ntBASIC18.6■□□□□ 0.57
MRM3Q9HC36 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 KRT8P7-201ENST00000533003 1432 ntBASIC18.6■□□□□ 0.57
MRM3Q9HC36 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 AC092338.2-201ENST00000568827 1415 ntBASIC18.6■□□□□ 0.57
MRM3Q9HC36 HOXB1-202ENST00000577092 1414 ntBASIC18.6■□□□□ 0.57
MRM3Q9HC36 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 CCR12P-201ENST00000446203 998 ntBASIC18.6■□□□□ 0.57
MRM3Q9HC36 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MRM3Q9HC36 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRM3Q9HC36 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRM3Q9HC36 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRM3Q9HC36 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRM3Q9HC36 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRM3Q9HC36 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.59■□□□□ 0.57
MRM3Q9HC36 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRM3Q9HC36 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MRM3Q9HC36 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms