Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 KRIT1-219ENST00000466166 545 ntTSL 415.33■□□□□ 0.041e-5■■■□□ 18
XRN2Q9H0D6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.045e-8■■■□□ 18
XRN2Q9H0D6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.045e-8■■■□□ 18
XRN2Q9H0D6 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.035e-8■■■□□ 18
XRN2Q9H0D6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.031e-5■■■□□ 18
XRN2Q9H0D6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.035e-6■■■□□ 18
XRN2Q9H0D6 CHRD-205ENST00000448472 3547 ntTSL 1 (best)15.25■□□□□ 0.035e-6■■■□□ 18
XRN2Q9H0D6 G3BP2-218ENST00000513927 426 ntTSL 315.24■□□□□ 0.031e-5■■■□□ 18
XRN2Q9H0D6 RPL23-205ENST00000470646 333 ntTSL 315.22■□□□□ 0.035e-8■■■□□ 18
XRN2Q9H0D6 IPO4-206ENST00000558718 554 ntTSL 215.18■□□□□ 0.025e-8■■■□□ 18
XRN2Q9H0D6 IPO4-213ENST00000560315 558 ntTSL 215.18■□□□□ 0.025e-8■■■□□ 18
XRN2Q9H0D6 TFAP4-205ENST00000575300 1326 ntTSL 215.17■□□□□ 0.021e-5■■■□□ 18
XRN2Q9H0D6 TECR-211ENST00000598298 868 ntTSL 515.16■□□□□ 0.021e-5■■■□□ 18
XRN2Q9H0D6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.025e-6■■■□□ 18
XRN2Q9H0D6 CHRD-212ENST00000470150 4234 ntTSL 215.12■□□□□ 0.015e-6■■■□□ 18
XRN2Q9H0D6 AL157392.3-202ENST00000597920 1446 ntTSL 515.12■□□□□ 0.011e-5■■■□□ 18
XRN2Q9H0D6 PPP1R12C-204ENST00000586992 4141 nt15.11■□□□□ 0.011e-5■■■□□ 18
XRN2Q9H0D6 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC15.06■□□□□ 05e-8■■■□□ 18
XRN2Q9H0D6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.011e-5■■■□□ 18
XRN2Q9H0D6 RAVER1-204ENST00000592208 4693 ntTSL 1 (best)14.99□□□□□ -0.016e-7■■■□□ 18
XRN2Q9H0D6 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC14.95□□□□□ -0.021e-5■■■□□ 18
XRN2Q9H0D6 SH3TC1-204ENST00000502350 2258 ntTSL 214.94□□□□□ -0.025e-8■■■□□ 18
XRN2Q9H0D6 WDR73-206ENST00000558608 2154 ntTSL 214.92□□□□□ -0.021e-5■■■□□ 18
XRN2Q9H0D6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.021e-5■■■□□ 18
XRN2Q9H0D6 MTHFD1-207ENST00000554677 783 ntTSL 314.9□□□□□ -0.025e-8■■■□□ 18
XRN2Q9H0D6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.035e-8■■■□□ 18
XRN2Q9H0D6 WDR1-208ENST00000505543 687 ntTSL 414.87□□□□□ -0.031e-5■■■□□ 18
XRN2Q9H0D6 DMKN-240ENST00000474992 306 ntTSL 314.83□□□□□ -0.041e-5■■■□□ 18
XRN2Q9H0D6 LINC01529-203ENST00000567313 552 ntTSL 414.79□□□□□ -0.045e-8■■■□□ 18
XRN2Q9H0D6 AHCY-204ENST00000480653 2211 ntTSL 214.73□□□□□ -0.055e-6■■■□□ 18
XRN2Q9H0D6 TECR-205ENST00000594807 569 ntTSL 414.72□□□□□ -0.051e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-209ENST00000596499 712 ntTSL 514.67□□□□□ -0.061e-5■■■□□ 18
XRN2Q9H0D6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.64□□□□□ -0.075e-8■■■□□ 18
XRN2Q9H0D6 ZNF33A-207ENST00000478556 539 ntTSL 314.63□□□□□ -0.071e-5■■■□□ 18
XRN2Q9H0D6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.62□□□□□ -0.071e-5■■■□□ 18
XRN2Q9H0D6 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.081e-5■■■□□ 18
XRN2Q9H0D6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.081e-5■■■□□ 18
XRN2Q9H0D6 USP32-207ENST00000588898 578 ntTSL 514.53□□□□□ -0.081e-5■■■□□ 18
XRN2Q9H0D6 TFAP4-203ENST00000573476 785 ntTSL 314.51□□□□□ -0.091e-5■■■□□ 18
XRN2Q9H0D6 ITPK1-212ENST00000557309 770 ntTSL 314.49□□□□□ -0.091e-5■■■□□ 18
XRN2Q9H0D6 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.091e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-228ENST00000610395 1270 ntTSL 514.41□□□□□ -0.11e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-227ENST00000419851 1247 ntTSL 314.41□□□□□ -0.11e-5■■■□□ 18
XRN2Q9H0D6 CHRD-204ENST00000420973 3492 ntTSL 1 (best)14.4□□□□□ -0.15e-6■■■□□ 18
XRN2Q9H0D6 TYK2-215ENST00000530560 558 ntTSL 314.37□□□□□ -0.112e-6■■■□□ 18
XRN2Q9H0D6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.111e-5■■■□□ 18
XRN2Q9H0D6 LZTR1-211ENST00000479606 3442 ntTSL 214.27□□□□□ -0.135e-8■■■□□ 18
XRN2Q9H0D6 DLST-210ENST00000555492 569 ntTSL 314.26□□□□□ -0.135e-8■■■□□ 18
XRN2Q9H0D6 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.141e-5■■■□□ 18
XRN2Q9H0D6 RPL23-202ENST00000378096 392 ntTSL 314.19□□□□□ -0.145e-8■■■□□ 18
XRN2Q9H0D6 RPL23-207ENST00000577407 615 ntTSL 2 BASIC14.19□□□□□ -0.145e-8■■■□□ 18
XRN2Q9H0D6 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.145e-8■■■□□ 18
XRN2Q9H0D6 KRIT1-212ENST00000440209 557 ntTSL 414.16□□□□□ -0.141e-5■■■□□ 18
XRN2Q9H0D6 TOMM40-204ENST00000589253 207 ntTSL 314.13□□□□□ -0.155e-8■■■□□ 18
XRN2Q9H0D6 LZTR1-203ENST00000415354 648 ntTSL 314.09□□□□□ -0.155e-8■■■□□ 18
XRN2Q9H0D6 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.163e-9■■■□□ 18
XRN2Q9H0D6 HMGB2-205ENST00000511316 1841 ntTSL 214.08□□□□□ -0.163e-9■■■□□ 18
XRN2Q9H0D6 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.161e-5■■■□□ 18
XRN2Q9H0D6 BRD1-204ENST00000438393 3051 ntTSL 214.02□□□□□ -0.161e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC14.02□□□□□ -0.171e-5■■■□□ 18
XRN2Q9H0D6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.171e-5■■■□□ 18
XRN2Q9H0D6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.175e-8■■■□□ 18
XRN2Q9H0D6 NEK3-204ENST00000552973 941 ntTSL 513.97□□□□□ -0.171e-5■■■□□ 18
XRN2Q9H0D6 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.181e-5■■■□□ 18
XRN2Q9H0D6 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.181e-5■■■□□ 18
XRN2Q9H0D6 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.91□□□□□ -0.181e-5■■■□□ 18
XRN2Q9H0D6 LTBP3-204ENST00000525443 3162 ntTSL 213.9□□□□□ -0.182e-10■■■□□ 18
XRN2Q9H0D6 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.9□□□□□ -0.185e-6■■■□□ 18
XRN2Q9H0D6 LZTR1-207ENST00000452988 878 ntTSL 313.89□□□□□ -0.195e-8■■■□□ 18
XRN2Q9H0D6 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.191e-5■■■□□ 18
XRN2Q9H0D6 IST1-211ENST00000537613 894 ntTSL 213.78□□□□□ -0.21e-5■■■□□ 18
XRN2Q9H0D6 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.72□□□□□ -0.211e-5■■■□□ 18
XRN2Q9H0D6 DDX41-218ENST00000625286 150 ntTSL 5 BASIC13.63□□□□□ -0.231e-5■■■□□ 18
XRN2Q9H0D6 TFAP4-204ENST00000574639 595 ntTSL 513.58□□□□□ -0.241e-5■■■□□ 18
XRN2Q9H0D6 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.245e-8■■■□□ 18
XRN2Q9H0D6 GLI4-206ENST00000520021 361 ntTSL 313.55□□□□□ -0.241e-5■■■□□ 18
XRN2Q9H0D6 PCIF1-203ENST00000616084 627 ntTSL 213.54□□□□□ -0.241e-5■■■□□ 18
XRN2Q9H0D6 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.241e-5■■■□□ 18
XRN2Q9H0D6 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.251e-5■■■□□ 18
XRN2Q9H0D6 RPL23-204ENST00000394333 444 ntTSL 2 BASIC13.5□□□□□ -0.255e-8■■■□□ 18
XRN2Q9H0D6 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-8■■■□□ 18
XRN2Q9H0D6 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.262e-6■■■□□ 18
XRN2Q9H0D6 MOB1A-204ENST00000494600 493 ntTSL 213.45□□□□□ -0.262e-10■■■□□ 18
XRN2Q9H0D6 ACADM-207ENST00000525881 914 ntTSL 213.4□□□□□ -0.261e-5■■■□□ 18
XRN2Q9H0D6 DMKN-242ENST00000476246 712 ntTSL 313.38□□□□□ -0.271e-5■■■□□ 18
XRN2Q9H0D6 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.276e-7■■■□□ 18
XRN2Q9H0D6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.285e-8■■■□□ 18
XRN2Q9H0D6 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.281e-5■■■□□ 18
XRN2Q9H0D6 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.281e-5■■■□□ 18
XRN2Q9H0D6 IST1-215ENST00000538850 1125 ntTSL 3 BASIC13.26□□□□□ -0.291e-5■■■□□ 18
XRN2Q9H0D6 TYK2-212ENST00000529422 622 ntTSL 513.25□□□□□ -0.291e-5■■■□□ 18
XRN2Q9H0D6 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.31e-5■■■□□ 18
XRN2Q9H0D6 DMKN-257ENST00000493517 505 ntTSL 513.15□□□□□ -0.31e-5■■■□□ 18
XRN2Q9H0D6 IST1-213ENST00000538565 1245 ntTSL 213.13□□□□□ -0.311e-5■■■□□ 18
XRN2Q9H0D6 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.13□□□□□ -0.315e-8■■■□□ 18
XRN2Q9H0D6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.311e-5■■■□□ 18
XRN2Q9H0D6 ZNF33A-206ENST00000476504 706 ntTSL 213.07□□□□□ -0.321e-5■■■□□ 18
XRN2Q9H0D6 MAPK8-209ENST00000429041 603 ntTSL 513.05□□□□□ -0.321e-5■■■□□ 18
XRN2Q9H0D6 DPH7-211ENST00000481839 798 ntTSL 313.04□□□□□ -0.321e-5■■■□□ 18
XRN2Q9H0D6 DDX41-219ENST00000629036 606 ntTSL 4 BASIC13.01□□□□□ -0.331e-5■■■□□ 18
Retrieved 100 of 21,068 protein–RNA pairs in 21.7 ms