Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 AC008894.3-201ENST00000624324 3103 ntBASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 PP12613-201ENST00000424958 2230 ntBASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 IGHV3-19-201ENST00000521488 291 ntBASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 AC104417.2-201ENST00000562989 1793 ntBASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTDSP1Q9GZU7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 YBX1P1-201ENST00000445822 960 ntBASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 LINC00602-201ENST00000629776 2065 ntBASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTDSP1Q9GZU7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 BX842568.3-201ENST00000418104 571 ntBASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms