Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 AC097488.1-201ENST00000507834 756 ntBASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO3Q9BXY4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 AL135905.2-201ENST00000584934 1404 ntBASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO3Q9BXY4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 AC012618.2-201ENST00000428058 849 ntBASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 UBE2SP1-201ENST00000450587 669 ntBASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 DGCR10-201ENST00000609839 495 ntBASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
RSPO3Q9BXY4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RSPO3Q9BXY4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RSPO3Q9BXY4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms