Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 AC083906.2-201ENST00000511578 360 ntBASIC18.15■□□□□ 0.5
EBF4Q9BQW3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 C1QL1P1-201ENST00000568105 661 ntBASIC18.15■□□□□ 0.5
EBF4Q9BQW3 MYC-208ENST00000641036 567 ntBASIC18.15■□□□□ 0.5
EBF4Q9BQW3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 AC012317.2-201ENST00000623305 2251 ntBASIC18.15■□□□□ 0.5
EBF4Q9BQW3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.15■□□□□ 0.5
EBF4Q9BQW3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
EBF4Q9BQW3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EBF4Q9BQW3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
EBF4Q9BQW3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EBF4Q9BQW3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.14■□□□□ 0.5
EBF4Q9BQW3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF4Q9BQW3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.13■□□□□ 0.49
EBF4Q9BQW3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.13■□□□□ 0.49
EBF4Q9BQW3 GUSBP6-202ENST00000438529 1198 ntBASIC18.13■□□□□ 0.49
EBF4Q9BQW3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 AC097658.1-201ENST00000475555 843 ntBASIC18.13■□□□□ 0.49
EBF4Q9BQW3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 AL121832.2-201ENST00000610979 668 ntBASIC18.13■□□□□ 0.49
EBF4Q9BQW3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EBF4Q9BQW3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms