Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE1Q99829 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE1Q99829 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 AL109659.2-201ENST00000606809 1674 ntBASIC18.63■□□□□ 0.57
CPNE1Q99829 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.63■□□□□ 0.57
CPNE1Q99829 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE1Q99829 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE1Q99829 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 AC011506.1-201ENST00000474329 610 ntBASIC18.62■□□□□ 0.57
CPNE1Q99829 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CPNE1Q99829 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE1Q99829 RPPH1-201ENST00000516869 333 ntBASIC18.62■□□□□ 0.57
CPNE1Q99829 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE1Q99829 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.62■□□□□ 0.57
CPNE1Q99829 MIR6786-201ENST00000616843 113 ntBASIC18.62■□□□□ 0.57
CPNE1Q99829 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 MYLKP1-201ENST00000509077 1580 ntBASIC18.62■□□□□ 0.57
CPNE1Q99829 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CPNE1Q99829 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE1Q99829 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE1Q99829 BCL2-203ENST00000589955 5011 ntBASIC18.62■□□□□ 0.57
CPNE1Q99829 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 AC008556.1-201ENST00000610908 2040 ntBASIC18.61■□□□□ 0.57
CPNE1Q99829 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CPNE1Q99829 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CPNE1Q99829 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE1Q99829 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE1Q99829 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 B3GAT3P1-201ENST00000471720 806 ntBASIC18.61■□□□□ 0.57
CPNE1Q99829 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CPNE1Q99829 AC090340.1-201ENST00000620778 4980 ntBASIC18.61■□□□□ 0.57
CPNE1Q99829 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE1Q99829 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE1Q99829 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE1Q99829 AC093677.2-201ENST00000600169 1863 ntBASIC18.6■□□□□ 0.57
CPNE1Q99829 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE1Q99829 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE1Q99829 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE1Q99829 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE1Q99829 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.6■□□□□ 0.57
CPNE1Q99829 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE1Q99829 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE1Q99829 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.6■□□□□ 0.57
CPNE1Q99829 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE1Q99829 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CPNE1Q99829 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE1Q99829 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE1Q99829 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE1Q99829 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE1Q99829 PCDHB18P-201ENST00000524813 2368 ntBASIC18.6■□□□□ 0.57
CPNE1Q99829 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE1Q99829 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE1Q99829 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE1Q99829 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE1Q99829 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE1Q99829 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE1Q99829 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE1Q99829 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CPNE1Q99829 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE1Q99829 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE1Q99829 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE1Q99829 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms