Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 MIR638-201ENST00000385237 100 ntBASIC14.06□□□□□ -0.16
AP1S3Q96PC3 CYP2T1P-201ENST00000432607 1285 ntBASIC14.06□□□□□ -0.16
AP1S3Q96PC3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 AC137761.2-201ENST00000561729 223 ntBASIC14.06□□□□□ -0.16
AP1S3Q96PC3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 AC145350.3-201ENST00000569033 163 ntBASIC14.06□□□□□ -0.16
AP1S3Q96PC3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 NTF6G-201ENST00000591094 616 ntBASIC14.06□□□□□ -0.16
AP1S3Q96PC3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
AP1S3Q96PC3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 ZNF815P-204ENST00000434898 1737 ntBASIC14.05□□□□□ -0.16
AP1S3Q96PC3 AC135050.7-201ENST00000624508 2218 ntBASIC14.05□□□□□ -0.16
AP1S3Q96PC3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 AC068338.2-201ENST00000563278 1430 ntBASIC14.05□□□□□ -0.16
AP1S3Q96PC3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S3Q96PC3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms