Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 AC112907.2-201ENST00000448639 330 ntBASIC20.72■□□□□ 0.91
SCLT1Q96NL6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 AC024243.1-201ENST00000609234 778 ntBASIC20.72■□□□□ 0.91
SCLT1Q96NL6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.72■□□□□ 0.91
SCLT1Q96NL6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 LETM1P2-201ENST00000597330 2178 ntBASIC20.72■□□□□ 0.91
SCLT1Q96NL6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 IRX1P1-201ENST00000438849 1838 ntBASIC20.71■□□□□ 0.91
SCLT1Q96NL6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 AL121956.5-201ENST00000625261 221 ntBASIC20.71■□□□□ 0.91
SCLT1Q96NL6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 RCC2P3-201ENST00000418112 1537 ntBASIC20.71■□□□□ 0.91
SCLT1Q96NL6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SCLT1Q96NL6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SCLT1Q96NL6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SCLT1Q96NL6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 AC034232.1-201ENST00000506026 1064 ntBASIC20.7■□□□□ 0.9
SCLT1Q96NL6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCLT1Q96NL6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 STARP1-201ENST00000397973 869 ntBASIC20.69■□□□□ 0.9
SCLT1Q96NL6 PCED1CP-201ENST00000419887 785 ntBASIC20.69■□□□□ 0.9
SCLT1Q96NL6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 AP000550.4-202ENST00000639755 178 ntBASIC20.69■□□□□ 0.9
SCLT1Q96NL6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCLT1Q96NL6 FEM1AP3-201ENST00000403722 1741 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms