Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXRED1Q96CU9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXRED1Q96CU9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 POM121L13P-201ENST00000422362 380 ntBASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 C1QL1P1-201ENST00000568105 661 ntBASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 AC068587.9-201ENST00000641814 219 ntBASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXRED1Q96CU9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
FOXRED1Q96CU9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 NBPF21P-201ENST00000425093 1451 ntBASIC16.18■□□□□ 0.18
FOXRED1Q96CU9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms