Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 FAM86EP-206ENST00000510506 987 ntBASIC17.56■□□□□ 0.4
TM9SF4Q92544 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 AL441883.1-201ENST00000566170 1045 ntBASIC17.56■□□□□ 0.4
TM9SF4Q92544 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM9SF4Q92544 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.56■□□□□ 0.4
TM9SF4Q92544 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TM9SF4Q92544 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 KRT8P45-201ENST00000414328 1447 ntBASIC17.55■□□□□ 0.4
TM9SF4Q92544 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM9SF4Q92544 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.54■□□□□ 0.4
TM9SF4Q92544 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 VENTXP5-201ENST00000523979 775 ntBASIC17.54■□□□□ 0.4
TM9SF4Q92544 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 KRT8P11-201ENST00000409686 1436 ntBASIC17.54■□□□□ 0.4
TM9SF4Q92544 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.54■□□□□ 0.4
TM9SF4Q92544 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF4Q92544 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 AC104581.1-202ENST00000635932 2618 ntBASIC17.53■□□□□ 0.4
TM9SF4Q92544 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms