Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 AC011558.1-201ENST00000623459 338 ntBASIC19.53■□□□□ 0.72
RNF139Q8WU17 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF139Q8WU17 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF139Q8WU17 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 MIR564-202ENST00000385049 94 ntBASIC19.52■□□□□ 0.72
RNF139Q8WU17 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 LINC01238-205ENST00000567549 1107 ntBASIC19.52■□□□□ 0.72
RNF139Q8WU17 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 AC010331.1-201ENST00000611423 582 ntBASIC19.52■□□□□ 0.72
RNF139Q8WU17 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF139Q8WU17 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF139Q8WU17 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.52■□□□□ 0.71
RNF139Q8WU17 AC093525.10-201ENST00000625130 1569 ntBASIC19.52■□□□□ 0.71
RNF139Q8WU17 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF139Q8WU17 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF139Q8WU17 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF139Q8WU17 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF139Q8WU17 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 TSPY5P-201ENST00000426936 936 ntBASIC19.51■□□□□ 0.71
RNF139Q8WU17 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.51■□□□□ 0.71
RNF139Q8WU17 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF139Q8WU17 AC092647.4-201ENST00000457211 535 ntBASIC19.51■□□□□ 0.71
RNF139Q8WU17 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF139Q8WU17 AL590326.2-201ENST00000625139 305 ntBASIC19.51■□□□□ 0.71
RNF139Q8WU17 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF139Q8WU17 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF139Q8WU17 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF139Q8WU17 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF139Q8WU17 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF139Q8WU17 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF139Q8WU17 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF139Q8WU17 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms