Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCC2Q8TAQ2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 AC092338.2-201ENST00000568827 1415 ntBASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCC2Q8TAQ2 AL390961.4-201ENST00000623958 2535 ntBASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 AL109659.2-201ENST00000606809 1674 ntBASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 TERF1P1-201ENST00000311003 1181 ntBASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 LIN28AP1-201ENST00000429574 405 ntBASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 AL353719.1-201ENST00000566847 864 ntBASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 RN7SL850P-201ENST00000579959 291 ntBASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 AC010653.2-201ENST00000623505 997 ntBASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.79■■□□□ 1.08
SMARCC2Q8TAQ2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 HMGA1P5-201ENST00000412453 271 ntBASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 TMPOP1-202ENST00000424642 1267 ntBASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 KRT18P57-201ENST00000443599 1254 ntBASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 AC092865.7-201ENST00000641832 219 ntBASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCC2Q8TAQ2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 AC008556.1-201ENST00000610908 2040 ntBASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 ATP5G1P1-201ENST00000448724 379 ntBASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 AC010203.1-204ENST00000548782 407 ntBASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMARCC2Q8TAQ2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.77■■□□□ 1.07
SMARCC2Q8TAQ2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SMARCC2Q8TAQ2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms