Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 AC009947.2-201ENST00000444014 672 ntBASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 AL358472.4-201ENST00000633140 710 ntBASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDND2Q8NHS1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 MIR4674-201ENST00000582457 87 ntBASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 AC091076.1-201ENST00000610741 619 ntBASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDND2Q8NHS1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 AC020916.1-201ENST00000587762 1774 ntBASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms