Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.76■□□□□ 0.43
SRFBP1Q8NEF9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 AC087499.1-201ENST00000418141 1075 ntBASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.75■□□□□ 0.43
SRFBP1Q8NEF9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 MIR4674-201ENST00000582457 87 ntBASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 AC145285.6-201ENST00000604632 637 ntBASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.74■□□□□ 0.43
SRFBP1Q8NEF9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 CR769767.2-201ENST00000622735 460 ntBASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFBP1Q8NEF9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms