Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 AC145285.6-201ENST00000604632 637 ntBASIC16.28■□□□□ 0.2
CPEB3Q8NE35 FAM87A-204ENST00000613235 858 ntBASIC16.28■□□□□ 0.2
CPEB3Q8NE35 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPEB3Q8NE35 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 AL499627.1-201ENST00000569373 2188 ntBASIC16.27■□□□□ 0.2
CPEB3Q8NE35 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.27■□□□□ 0.2
CPEB3Q8NE35 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 MIR3180-5-201ENST00000583743 153 ntBASIC16.27■□□□□ 0.2
CPEB3Q8NE35 AC133561.5-201ENST00000635547 218 ntBASIC16.27■□□□□ 0.2
CPEB3Q8NE35 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.27■□□□□ 0.2
CPEB3Q8NE35 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CPEB3Q8NE35 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 AC036111.1-201ENST00000533973 1582 ntBASIC16.26■□□□□ 0.19
CPEB3Q8NE35 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 KRT18P22-201ENST00000402024 1347 ntBASIC16.26■□□□□ 0.19
CPEB3Q8NE35 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 MIR564-202ENST00000385049 94 ntBASIC16.26■□□□□ 0.19
CPEB3Q8NE35 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 CR769767.2-201ENST00000622735 460 ntBASIC16.26■□□□□ 0.19
CPEB3Q8NE35 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 KRT8P45-201ENST00000414328 1447 ntBASIC16.26■□□□□ 0.19
CPEB3Q8NE35 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPEB3Q8NE35 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 WIZP1-201ENST00000531444 2299 ntBASIC16.25■□□□□ 0.19
CPEB3Q8NE35 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms