Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 AC126763.1-201ENST00000552015 2118 ntBASIC20.36■□□□□ 0.85
RDH13Q8NBN7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RDH13Q8NBN7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 MIR564-202ENST00000385049 94 ntBASIC20.35■□□□□ 0.85
RDH13Q8NBN7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 MIR3180-5-201ENST00000583743 153 ntBASIC20.35■□□□□ 0.85
RDH13Q8NBN7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RDH13Q8NBN7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 ECEL1P3-201ENST00000427961 737 ntBASIC20.34■□□□□ 0.85
RDH13Q8NBN7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RDH13Q8NBN7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 HMGA1P5-201ENST00000412453 271 ntBASIC20.33■□□□□ 0.85
RDH13Q8NBN7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 AC012306.2-201ENST00000609350 630 ntBASIC20.33■□□□□ 0.85
RDH13Q8NBN7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RDH13Q8NBN7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RDH13Q8NBN7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RDH13Q8NBN7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RDH13Q8NBN7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RDH13Q8NBN7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RDH13Q8NBN7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RDH13Q8NBN7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RDH13Q8NBN7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RDH13Q8NBN7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RDH13Q8NBN7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms