Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 HOMER2P1-201ENST00000455653 964 ntBASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 AL359075.1-203ENST00000462729 1002 ntBASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 MIR3917-201ENST00000580971 93 ntBASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 AL157888.1-201ENST00000631930 593 ntBASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01555Q8NAE3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LINC01555Q8NAE3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
LINC01555Q8NAE3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.89■□□□□ 0.46
LINC01555Q8NAE3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 MYLKP1-201ENST00000509077 1580 ntBASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 AP000593.1-201ENST00000393668 712 ntBASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 STARP1-201ENST00000397973 869 ntBASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 AC092647.4-201ENST00000457211 535 ntBASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 RASA4DP-201ENST00000460726 1199 ntBASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 AC126763.1-201ENST00000552015 2118 ntBASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01555Q8NAE3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 NTF6B-201ENST00000591913 560 ntBASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 MYC-208ENST00000641036 567 ntBASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 AL163051.1-201ENST00000569214 1512 ntBASIC17.88■□□□□ 0.45
LINC01555Q8NAE3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 AC034232.1-201ENST00000506026 1064 ntBASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 MIR3180-4-201ENST00000582223 153 ntBASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 AL590326.2-201ENST00000625139 305 ntBASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms