Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC155Q8N6L0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC155Q8N6L0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC155Q8N6L0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC155Q8N6L0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 CLEC4GP1-201ENST00000596555 870 ntBASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC155Q8N6L0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC155Q8N6L0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 AC141586.3-201ENST00000562166 1838 ntBASIC21.04■□□□□ 0.96
CCDC155Q8N6L0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC155Q8N6L0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC155Q8N6L0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms