Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.02■□□□□ -0
C12orf54Q6X4T0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.02■□□□□ -0
C12orf54Q6X4T0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
C12orf54Q6X4T0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.02■□□□□ -0
C12orf54Q6X4T0 SPDYE13P-201ENST00000445314 798 ntBASIC15.02■□□□□ -0
C12orf54Q6X4T0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.02■□□□□ -0
C12orf54Q6X4T0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.02■□□□□ -0
C12orf54Q6X4T0 MIR3180-1-201ENST00000580374 94 ntBASIC15.02■□□□□ -0
C12orf54Q6X4T0 MIR3180-3-201ENST00000584616 94 ntBASIC15.02■□□□□ -0
C12orf54Q6X4T0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.02■□□□□ -0
C12orf54Q6X4T0 AL732292.2-201ENST00000609649 430 ntBASIC15.02■□□□□ -0
C12orf54Q6X4T0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
C12orf54Q6X4T0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
C12orf54Q6X4T0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 KRT18P1-202ENST00000452408 1331 ntBASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 TMEM179-206ENST00000616017 1645 ntBASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 AP005212.1-201ENST00000581547 1997 ntBASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.01□□□□□ -0.01
C12orf54Q6X4T0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15□□□□□ -0.01
C12orf54Q6X4T0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15□□□□□ -0.01
C12orf54Q6X4T0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
C12orf54Q6X4T0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15□□□□□ -0.01
C12orf54Q6X4T0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C12orf54Q6X4T0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms