Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.85■□□□□ 0.93
COL13A1Q5TAT6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 KRT89P-201ENST00000620027 1478 ntBASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 KRT17P7-201ENST00000451704 1104 ntBASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.84■□□□□ 0.93
COL13A1Q5TAT6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 AC092658.1-201ENST00000505836 891 ntBASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 AL662799.1-202ENST00000614205 422 ntBASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 HOXB1-202ENST00000577092 1414 ntBASIC20.83■□□□□ 0.93
COL13A1Q5TAT6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.83■□□□□ 0.92
COL13A1Q5TAT6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL13A1Q5TAT6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 AC011467.2-201ENST00000598425 242 ntBASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL13A1Q5TAT6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 HAUS4P1-201ENST00000406739 1145 ntBASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 HCG4B-203ENST00000450128 991 ntBASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 SPDYE22P-201ENST00000582158 798 ntBASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL13A1Q5TAT6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms