Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 KRT8P32-201ENST00000512863 1461 ntBASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 RARRES2P6-201ENST00000567333 442 ntBASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 AL121832.2-201ENST00000610979 668 ntBASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00242Q5T6M2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 KRT8P45-201ENST00000414328 1447 ntBASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 CROCCP5-201ENST00000436658 830 ntBASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 C1QL1P1-201ENST00000568105 661 ntBASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 SOX15-203ENST00000570788 1093 ntBASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 MYC-209ENST00000641252 345 ntBASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00242Q5T6M2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 MIR4758-201ENST00000577688 71 ntBASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 AL357033.4-201ENST00000617703 1807 ntBASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms