Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AP002982.1-201ENST00000492365 877 ntBASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 AL109659.2-201ENST00000606809 1674 ntBASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRIF1Q5T3J3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 AC138028.4-201ENST00000564984 1845 ntBASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 AC092666.2-201ENST00000613287 246 ntBASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 AC020916.1-201ENST00000587762 1774 ntBASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRIF1Q5T3J3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 AC008040.2-201ENST00000461049 708 ntBASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 AC011298.2-201ENST00000617989 482 ntBASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 KRT16P1-201ENST00000399124 1418 ntBASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.55■□□□□ 0.4
LRIF1Q5T3J3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 ESRRAP1-201ENST00000400596 1257 ntBASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRIF1Q5T3J3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms