Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 AC083906.6-201ENST00000641366 219 ntBASIC19.68■□□□□ 0.74
VARS2Q5ST30 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 Z83836.1-201ENST00000624605 1642 ntBASIC19.68■□□□□ 0.74
VARS2Q5ST30 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.68■□□□□ 0.74
VARS2Q5ST30 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARS2Q5ST30 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 AC116562.4-201ENST00000641316 2276 ntBASIC19.67■□□□□ 0.74
VARS2Q5ST30 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 AP003733.1-201ENST00000491725 852 ntBASIC19.67■□□□□ 0.74
VARS2Q5ST30 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 KRT18P41-201ENST00000518924 1277 ntBASIC19.67■□□□□ 0.74
VARS2Q5ST30 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.67■□□□□ 0.74
VARS2Q5ST30 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARS2Q5ST30 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VARS2Q5ST30 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.66■□□□□ 0.74
VARS2Q5ST30 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.66■□□□□ 0.74
VARS2Q5ST30 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
VARS2Q5ST30 AC009065.1-201ENST00000564055 1225 ntBASIC19.66■□□□□ 0.74
VARS2Q5ST30 MIR3652-201ENST00000579335 131 ntBASIC19.66■□□□□ 0.74
VARS2Q5ST30 AC005332.3-201ENST00000589904 676 ntBASIC19.66■□□□□ 0.74
VARS2Q5ST30 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.66■□□□□ 0.74
VARS2Q5ST30 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.66■□□□□ 0.74
VARS2Q5ST30 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VARS2Q5ST30 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.66■□□□□ 0.74
VARS2Q5ST30 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARS2Q5ST30 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VARS2Q5ST30 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARS2Q5ST30 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms