Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 AC034232.1-201ENST00000506026 1064 ntBASIC16.34■□□□□ 0.21
FREM1Q5H8C1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 AC104390.1-201ENST00000555663 520 ntBASIC16.34■□□□□ 0.21
FREM1Q5H8C1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 AC112497.1-201ENST00000624824 639 ntBASIC16.34■□□□□ 0.21
FREM1Q5H8C1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 AL031432.5-201ENST00000641059 760 ntBASIC16.34■□□□□ 0.21
FREM1Q5H8C1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 KRT8P7-201ENST00000533003 1432 ntBASIC16.34■□□□□ 0.21
FREM1Q5H8C1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 HOMER2P1-201ENST00000455653 964 ntBASIC16.34■□□□□ 0.21
FREM1Q5H8C1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.33■□□□□ 0.21
FREM1Q5H8C1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FREM1Q5H8C1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
FREM1Q5H8C1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FREM1Q5H8C1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 AC010240.3-201ENST00000607688 395 ntBASIC16.33■□□□□ 0.2
FREM1Q5H8C1 AC069148.1-201ENST00000608741 768 ntBASIC16.33■□□□□ 0.2
FREM1Q5H8C1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.33■□□□□ 0.2
FREM1Q5H8C1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
FREM1Q5H8C1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.32■□□□□ 0.2
FREM1Q5H8C1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 AC126763.1-201ENST00000552015 2118 ntBASIC16.31■□□□□ 0.2
FREM1Q5H8C1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms