Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 AC036111.1-201ENST00000533973 1582 ntBASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 AL157888.1-201ENST00000631930 593 ntBASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTC1Q2NKJ3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 AL023284.2-201ENST00000405850 579 ntBASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 KRT16P4-201ENST00000453883 522 ntBASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.88■□□□□ 0.77
CTC1Q2NKJ3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 MIR3917-201ENST00000580971 93 ntBASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 AC009237.14-201ENST00000609975 1594 ntBASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTC1Q2NKJ3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 AC093484.2-201ENST00000580996 2166 ntBASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.86■□□□□ 0.77
CTC1Q2NKJ3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms