Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 HOXB1-202ENST00000577092 1414 ntBASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 ESPNP-201ENST00000270691 2015 ntBASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 AP000593.1-201ENST00000393668 712 ntBASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 AL162741.1-201ENST00000565563 1558 ntBASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RSPO1Q2MKA7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 AC099343.3-201ENST00000605834 2503 ntBASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 ABALON-201ENST00000629058 1903 ntBASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 NAPSB-206ENST00000562112 1266 ntBASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 AC093677.2-201ENST00000600169 1863 ntBASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RSPO1Q2MKA7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 FAM87A-204ENST00000613235 858 ntBASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms