Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
DSC1Q08554 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DSC1Q08554 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DSC1Q08554 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DSC1Q08554 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DSC1Q08554 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DSC1Q08554 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
DSC1Q08554 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.77■□□□□ 0.76
DSC1Q08554 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.77■□□□□ 0.76
DSC1Q08554 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.77■□□□□ 0.76
DSC1Q08554 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.77■□□□□ 0.76
DSC1Q08554 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.77■□□□□ 0.76
DSC1Q08554 IGHV3-41-201ENST00000613121 348 ntBASIC19.77■□□□□ 0.76
DSC1Q08554 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
DSC1Q08554 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.77■□□□□ 0.76
DSC1Q08554 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DSC1Q08554 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.77■□□□□ 0.76
DSC1Q08554 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.77■□□□□ 0.76
DSC1Q08554 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DSC1Q08554 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
DSC1Q08554 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
DSC1Q08554 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
DSC1Q08554 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
DSC1Q08554 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.76■□□□□ 0.75
DSC1Q08554 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 AC233702.3-201ENST00000578656 1387 ntBASIC19.76■□□□□ 0.75
DSC1Q08554 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
DSC1Q08554 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.76■□□□□ 0.75
DSC1Q08554 AL592071.1-201ENST00000611956 408 ntBASIC19.76■□□□□ 0.75
DSC1Q08554 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
DSC1Q08554 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.76■□□□□ 0.75
DSC1Q08554 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.76■□□□□ 0.75
DSC1Q08554 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.76■□□□□ 0.75
DSC1Q08554 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
DSC1Q08554 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DSC1Q08554 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.75■□□□□ 0.75
DSC1Q08554 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
DSC1Q08554 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.75■□□□□ 0.75
DSC1Q08554 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.75■□□□□ 0.75
DSC1Q08554 AL353692.3-201ENST00000407031 1396 ntBASIC19.75■□□□□ 0.75
DSC1Q08554 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
DSC1Q08554 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
DSC1Q08554 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.75■□□□□ 0.75
DSC1Q08554 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.75■□□□□ 0.75
DSC1Q08554 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.75■□□□□ 0.75
DSC1Q08554 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.75■□□□□ 0.75
DSC1Q08554 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.75■□□□□ 0.75
DSC1Q08554 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.75■□□□□ 0.75
DSC1Q08554 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
DSC1Q08554 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DSC1Q08554 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DSC1Q08554 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DSC1Q08554 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.74■□□□□ 0.75
DSC1Q08554 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
DSC1Q08554 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.74■□□□□ 0.75
DSC1Q08554 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.74■□□□□ 0.75
DSC1Q08554 IFNL4P1-201ENST00000607083 540 ntBASIC19.74■□□□□ 0.75
DSC1Q08554 AL732292.2-201ENST00000609649 430 ntBASIC19.74■□□□□ 0.75
DSC1Q08554 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DSC1Q08554 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
DSC1Q08554 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.74■□□□□ 0.75
DSC1Q08554 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DSC1Q08554 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DSC1Q08554 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.74■□□□□ 0.75
DSC1Q08554 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DSC1Q08554 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DSC1Q08554 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DSC1Q08554 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DSC1Q08554 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms